Oligonucleotide Synthesis, RNA Raw Materials & Modification

2'-O-Propargyl-cytidine

4-amino-1-[(2R,3R,4R,5R)-4-hydroxy-5-(hydroxymethyl)-3-prop-2-ynoxyoxolan-2-yl]pyrimidin-2-one

Product NoCH70067CAS No206552-85-4Purity99% (HPLC)
2'-O-Propargyl-cytidine

Product summary

Quick view

Product family
Oligonucleotide Synthesis, RNA Raw Materials & Modification
Chemical Name
4-amino-1-[(2R,3R,4R,5R)-4-hydroxy-5-(hydroxymethyl)-3-prop-2-ynoxyoxolan-2-yl]pyrimidin-2-one
MF
C12H15N3O5
MW
281.26
Purity
99% (HPLC)

2'-O-Propargyl-cytidine is a modified cytidine nucleoside bearing a 2'-O-propargyl sugar substituent. Key identifiers include CAS 206552-85-4, molecular formula C12H15N3O5, molecular weight 281.26, and PubChem CID 22885208.

The 2'-O-propargyl group provides a terminal alkyne handle, placing this nucleoside in click-compatible oligonucleotide research contexts. It should be presented as a modified nucleoside/reference compound, not as a protected CE phosphoramidite monomer.

Synonyms

2'-O-propargylcytidine; 2'-O-propargyl cytidine

Identity and specifications

Catalog No.CH70067
CAS No.206552-85-4
Molecular FormulaC12H15N3O5
Molecular Weight281.26
Exact Mass281.10117059
PubChem CID22885208
InChIKeyFJGRSBJPLPTKDE-QCNRFFRDSA-N
Structural NoteCytidine nucleoside with a 2'-O-propargyl sugar modification
Purity99% (HPLC)

Storage conditions

10-25 C; cool dry and well ventilated

Technical attributes

Material class
2'-O-propargyl nucleoside
Nucleobase
Cytosine
Sugar modification
2'-O-propargyl
Conjugation handle
Terminal alkyne
Packaging
10 mg; 25 mg; 50 mg; 100 mg; 1 g; 5 g; 10 g; 50 g; 100 g; 1 kg; Custom packaging on request
Physical form
Powder

Application context

  • Click-compatible oligonucleotide chemistry: 2'-O-propargyl nucleoside chemistry is reported in enzymatic oligonucleotide preparation and DNA click-modification contexts.
  • Alkyne-handle nucleoside: the 2'-O-propargyl substituent provides a terminal alkyne handle for structure-aware click-chemistry research workflows.
  • Modified-cytidine reference: use as a structure and identifier reference for 2'-O-propargyl cytidine chemistry.

Public references

Frequently Asked Questions

What is 2'-O-Propargyl-cytidine?

It is a modified cytidine nucleoside bearing a 2'-O-propargyl sugar substituent. PubChem confirms CAS 206552-85-4 as CID 22885208.

What does the propargyl group add?

The 2'-O-propargyl group provides a terminal alkyne handle, which places this type of nucleoside in click-compatible oligonucleotide chemistry contexts.

Is CH70067 a phosphoramidite monomer?

No. CH70067 is documented as the modified nucleoside 2'-O-Propargyl-cytidine. A protected CE phosphoramidite would require separate structural evidence and identifiers.

What identifiers should match for CH70067?

Use CAS 206552-85-4, molecular formula C12H15N3O5, molecular weight 281.26, PubChem CID 22885208, and InChIKey FJGRSBJPLPTKDE-QCNRFFRDSA-N.

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