Oligonucleotide Synthesis, RNA Raw Materials & Modification

(S)-1-(2,3-Dihydroxypropyl)cytosine

4-amino-1-[(2S)-2,3-dihydroxypropyl]pyrimidin-2-one

제품 번호CH70002CAS 번호55559-70-1순도>=98%
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제품 개요

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제품군
Oligonucleotide Synthesis, RNA Raw Materials & Modification
화학명
4-amino-1-[(2S)-2,3-dihydroxypropyl]pyrimidin-2-one
분자식
C7H11N3O3
분자량
185.18
순도
>=98%

(S)-1-(2,3-Dihydroxypropyl)cytosine is the unprotected (S)-GNA (glycol nucleic acid) cytosine nucleoside: a cytosine joined at N1 to an acyclic (S)-2,3-dihydroxypropyl "glycol" backbone in place of a ribose or deoxyribose sugar. CHEMOS lists it as catalog CH70002 with CAS 55559-70-1, molecular formula C7H11N3O3, and molecular weight 185.18 (PubChem CID 11805434; InChIKey LTTDCEYZEHQDGW-YFKPBYRVSA-N).

This is the parent glycol-cytosine unit: protecting the base and differentiating the two backbone hydroxyls yields the (S)-GNA-C phosphoramidite used to add a GNA cytosine during solid-phase oligonucleotide synthesis. According to PubMed, glycol nucleic acid is an acyclic nucleic-acid analog joined by phosphodiester bonds that is incorporated into oligonucleotides via phosphoramidite chemistry, and an (S)-GNA nucleotide increases resistance to nuclease degradation while having little impact on duplex structure.

동의어

(S)-GNA-C; 1-[(S)-2,3-dihydroxypropyl]cytosine; (S)-glycol cytosine nucleoside

식별 정보 및 규격

Catalog No.CH70002
CAS No.55559-70-1
Molecular FormulaC7H11N3O3
Molecular Weight185.18
PubChem CID11805434
InChIKeyLTTDCEYZEHQDGW-YFKPBYRVSA-N
Backbone(S)-GNA (glycol nucleic acid), unprotected cytosine
Purity>=98%

기술 속성

Material class
(S)-GNA nucleoside
Nucleobase
Cytosine
Backbone scaffold
(S)-2,3-dihydroxypropyl
Protection state
Unprotected
Packaging
10 mg; 25 mg; 50 mg; 100 mg; Custom packaging on request

응용 맥락

  • Parent (S)-GNA-C nucleoside: the plain glycol-cytosine unit from which the base-protected monomer and (S)-GNA-C phosphoramidite are prepared.
  • Acyclic backbone unit: the (S)-2,3-dihydroxypropyl glycol replaces the sugar ring, the defining feature of a GNA nucleotide.
  • Nuclease-resistance research: according to PubMed, (S)-GNA incorporation has been studied for increasing resistance to exonuclease/phosphodiesterase degradation in siRNA duplexes.

관련 기술 자료

공개 출처

자주 묻는 질문

How does an (S)-GNA cytosine differ from a normal cytidine?

In place of the ribose/deoxyribose sugar ring, the cytosine sits on an acyclic (S)-2,3-dihydroxypropyl (glycol) backbone. This is the defining feature of glycol nucleic acid (GNA), a simplified acyclic nucleic-acid analog joined by phosphodiester bonds.

What is this compound used to make?

It is the parent (S)-GNA cytosine nucleoside: protecting the base and differentiating the two backbone hydroxyls into dimethoxytrityl and phosphoramidite handles gives the (S)-GNA-C phosphoramidite used to add a GNA cytosine during oligonucleotide synthesis.

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